📖 Biochemistry
Polyprotic Acids
Polyprotic Acids
• Some acids are polyprotic acids; they can lose more than one proton.
• In this case, the conjugate base is also a weak acid.
• For example: Carbonic acid (H2CO3 ) can lose two protons sequentially.
• Each dissociation has a unique Ka and pKa value.
Ka1 = [H+ ][HCO3 - ] / [H2CO3]
Ka2 = [H+ ][CO3 -2 ] / [HCO3- ]
Note: (The difference between a weak acid and its conjugate base differ is one hydrogen)
Glycogen Storage Diseases
BiochemistryA glycogen storage disease (GSD, also glycogenosis and dextrinosis) is a metabolic disorder caused by enzyme deficiencies affecting either glycogen synthesis, glycogen breakdown or glycolysis (glucose breakdown), typically in muscles and/or liver cells. GSD has two classes of cause: genetic and acquired.
Mnemonic:VP CAM HT.– Very Poor Carbohydrate Affects Muscle and Hepatic Target.
- Type I – Von Gierke’s disease
- Type II – Pompe’s disease
- Type III – Cori’s disease
- Type IV – Anderson’s disease
- Type V – McArdle’s disease
- Type VI – Her’s disease
- Type VII – Tauri’s disease
Type 0 (Glycogen synthase deficiency)
There is hypoglycemia; hyperketonemia and early death.
Type I (Glucose-6-phosphatase deficiency)-Von Gierke’s disease
- most common autosomal recessive disease.
- characterized by severe hypoglycemia that coincides with metabolic acidosis,
- ketonemia and elevated lactate (due to excess glycolysis) and alanine
Type II (Lysosomal α1->4 and α1->6 Glucosidase deficiency)- Pompes disease
- It affects predominantly the heart and skeletal muscle, producing muscle weakness and cardiomegaly. Liver function is normal and patients do not have hypoglycemia. Two forms identified;
(1) infantile (pompes disease) that develop in first few months of life with weakness and respiratory difficulties and
(2) juvenile that is present in second or third decade of life with difficulty in walking.
Type III (Amylo-1,6-Glucosidase deficiency)-Forbe’s or Cori’s disease
- Deficiency of glycogen debranching enzyme results in storage of an abnormal form of glycogen (limit dextrinosis).
- Both liver and muscle are affected (type IIIA), producing hepatomegaly and muscle weakness. About 15% have only liver involvement (Type IIIB).
Differentiation from type I is by hyperglycemic response to galactose, low concentration of urate and lactate in blood, and elevated serum transaminases and creatinine kinase activities
Type IV (Branching Enzyme deficiency)-Andersons disease of Amylopectinosis
- production of an abnormal form of unbranched glycogen in all tissue.
- Patients exhibit hepatospleenomegaly with ascites and liver failure.
- There is death from heart or liver failure before 5 years of age.
Type V (Muscle Phosphorylase deficiency)-McArdle’s disease
- Increased plasma creatine kinase activity at rest,
- failure of ischemic exercise to increase serum lactate concentrations while producing an exaggerated increase in ammonia,
- myoglobinuria and diminished activity of muscle phosphorylase establish the diagnosis.
TYPE VI (LIVER PHOSPHORYLASE DEFICIENCY)- HERS’ DISEASE
- It manifest as hepatomegaly caused by increased deposits of normal glycogen in liver or in red or white blood cells.
Type VII (Muscle and erythrocyte phosphofructokinase deficiency)-Taruis’ disease
- Abnormal glycogen in muscle.
- Exercise intolerance, unresponsiveness to glucose administration, and hemolysis (caused by decreased glycolysis in RBC) are noted clinically,
- hyperbilirubinemia, pigmenturia and reticulocytosis.
LIPIDS
BiochemistryLIPIDS
The lipids are a heterogeneous group of compounds, including fats, oils, steroids, waxes, and related compounds, which are related more by their physical than by their chemical properties.
Lipids are non-polar (hydrophobic) compounds, soluble in organic solvents.
Most membrane lipids are amphipathic, having a non-polar end and a polar end
Lipids are important in biological systems because they form the cell membrane, a mechanical barrier that divides a cell from the external environment.
Lipids also provide energy for life and several essential vitamins are lipids.
Lipids can be divided in two major classes, nonsaponifiable lipids and saponifiable lipids.
A nonsaponifiable lipid cannot be broken up into smaller molecules by hydrolysis, which includes triglycerides, waxes, phospholipids, and sphingolipids.
A saponifiable lipid contains one or more ester groups allowing it to undergo hydrolysis in the presence of an acid, base, or enzyme.
Nonsaponifiable lipids include steroids, prostaglandins, and terpenes
Nonpolar lipids, such as triglycerides, are used for energy storage and fuel.
Polar lipids, which can form a barrier with an external water environment, are used in membranes.
Polar lipids include glycerophospholipids and sphingolipids.
Fatty acids are important components of all of these lipids.
Comparison of Fatty acid synthesis and b-oxidation pathways
Biochemistry|
|
b Oxidation Pathway |
Fatty Acid Synthesis |
|
pathway location |
mitochondrial matrix |
cytosol |
|
acyl carriers (thiols) |
Coenzyme-A |
phosphopantetheine (ACP) & cysteine |
|
electron acceptors/donor |
FAD & NAD+ |
NADPH |
|
hydroxyl intermediate |
L |
D |
|
2-C product/donor |
acetyl-CoA |
malonyl-CoA (& acetyl-CoA) |
